Data Download

Genome Assembly Sequence (FASTA Format)

SpeciesChromosome Number ( + Scaffolds)File NameFile SizeMD5SUM
Gossypium arboreum, CRI 13 + 4,503 genome.Garb.CRI.fa.gz 483 MB cf31e820f5fe70b8c23179570e27d0e4
Gossypium raimondii, JGI 13 + 1,020 genome.Grai.JGI.fa.gz 217 MB 4ef997d70cd0c958b3de843603394559
Gossypium hirsutum, NAU 26 + 38,951 genome.Ghir.NAU.fa.gz 613 MB 652f685df812f73b64b026b2d2cb27a1
Gossypium barbadense, NAU 26 + 2,013 genome.Gbar.NAU.fa.gz 585 MB e0d591a3d8e5c800ef2d7900014d2b32

Gene Annotation (GFF3 Format)

SpeciesGene NumberFile NameFile SizeMD5SUM
Gossypium arboreum, CRI 40,960 gene.Garb.CRI.gff3.gz 3.7 MB cfa43ed300c6e49b3a3a3d3ec74d3a35
Gossypium raimondii, JGI 37,505 gene.Grai.JGI.gff3.gz 9.2 MB a282af896a3da97664ec24e116a4f02b
Gossypium hirsutum, NAU 70,478 gene.Ghir.NAU.gff3.gz 8.8 MB 51e2a14091c2b0a1a84d28217a8f2c23
Gossypium barbadense, NAU 77,358 gene.Gbar.NAU.gff3.gz 6.3 MB 14e870cc9365a757fcc581216f7fabfe

Gene, Transcript, CDS and Protein Sequences (FASTA Format)

SpeciesData TypeFile NameFile SizeMD5SUM
Gossypium raimondii, JGI gene sequence gene.seq.Grai.JGI.fa.gz 38 MB ad14936a467c96b61ef0f16831963677
Gossypium hirsutum, NAU gene sequence gene.seq.Ghir.NAU.fa.gz 67 MB 9841c786474aebc5d3eb0deb288a5e51
Gossypium barbadense, NAU gene sequence gene.seq.Gbar.NAU.fa.gz 64 MB 2316804b88f56af9d6158a1d5e6ac721
 
Gossypium raimondii, JGI principle transcript sequence transcript.seq.Grai.JGI.fa.gz 20 MB 2665cf2aef680dd00d980c7f0ca12ac6
Gossypium hirsutum, NAU principle transcript sequence transcript.seq.Ghir.NAU.fa.gz 28 MB 3e21e2dc747fb88d3832b49e5a1a98a9
Gossypium barbadense, NAU principle transcript sequence transcript.seq.Gbar.NAU.fa.gz 29 MB 9de9d7abc54089feb2deb553f226049f
 
Gossypium arboreum, CRI CDS sequence CDS.seq.Garb.CRI.fa.gz 16 MB bb8d1bdfa20f530a7ef449789f7ab45b
Gossypium raimondii, JGI CDS sequence CDS.seq.Grai.JGI.fa.gz 15 MB efb827dea68c47ad6002dc61f48308aa
Gossypium hirsutum, NAU CDS sequence CDS.seq.Ghir.NAU.fa.gz 28 MB a518faec1389991e9c1c2ef40de10469
Gossypium barbadense, NAU CDS sequence CDS.seq.Gbar.NAU.fa.gz 29 MB 9e09062da14f7669d416dfa357bea330
 
Gossypium arboreum, CRI protein sequence protein.seq.Garb.CRI.fa.gz 11 MB 276ac9ab4978b27f9dcd71525c64f0be
Gossypium raimondii, JGI protein sequence protein.seq.Grai.JGI.fa.gz 11 MB 994e7c5321deafc59427d7f1813e2792
Gossypium hirsutum, NAU protein sequence protein.seq.Ghir.NAU.fa.gz 19 MB d67e5a94004d2374fe242a3880a875e7
Gossypium barbadense, NAU protein sequence protein.seq.Gbar.NAU.fa.gz 20 MB 75d5e9d8ae3baee455c56746a9d2420e

Gene Expression (Tab-delimited Table)

SpeciesData TypeFile NameFile SizeMD5SUM
- Samples sample.sheet.txt 7.4 KB 4032c986b6be80cb2c9ffda05e604c59
     
Gossypium hirsutum, JGI FPKM values gene.FPKM.Ghir.JGI.txt.gz 31 MB 6a61eeb1a3a1fadf3eb4d30f723fcde8